Fiji imagej 3d3/14/2024 If ‘None’ is selected, the color is taken from the stack image. These attributes have the following meaning: Top How to change the color, transparency… of a 3D objectĬolor, transparency, threshold and displayed channels of color images are so-called attributes of 3D objects. Selection is indicated by a red bounding box. ![]() An object is selected by a single left mouse click. ![]() To transform a specific object, that object needs to be selected. Individual objects can be transformed with the same key/mouse combinations. On many platforms, it is alternatively possible to scroll (while the ‘Hand’ tool is selected) for zooming. Zooming: Zooming is done by selecting the ‘Glas’ tool in ImageJ’s tool bar and drag with the left mouse button.Translation: Dragging while pressing the ‘Shift’ key shifts the view.If no 3D object is selected, dragging with the left mouse button rotates the view around the universe center. Rotation: Select the ‘Hand’ tool in ImageJ’s tool bar.The user can rotate, translate and zoom in the 3D space: Two sorts of transformations are distinguished: 1. Top How to interact with the viewer (rotate, shift, zoom) Channels: If displaying color images, this specifies the color channels which are to be displayed.Īfter clicking OK, the 3D object appears in the viewer window.A value of 2 means here that the image is downsampled by a factor of 2 in x-, y- and z-direction. Resampling factor: Large images require downsampling before displaying, to be rendered interactively.For all other display modes, this value is the lower threshold of displayed values. Threshold: For surfaces, this is the isovalue of the surface.Display as: Stacks can be displayed as volume renderings, orthoslices, surfaces or surface plots.The user can select from a list of all open images. ![]()
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